Figures were created with UCSF Chimera and ChimeraX, developed by the Resource for Biocomputing, Visualization, and Informatics at the University of California, San Francisco, with support from National Institutes of Health R01-GM129325 and the Office of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases
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For evaluation, we randomly split the 80,000 patients into 80% of the patients for training and 20% of the patients for testing
The evolutionary distances were calculated using the Neighbour-Joining method default options, and the bootstrap method for 1,000 replicates